INFO: No output directory specified (--dir)
INFO: Using directory: "Tomography_20241222_023618"
INFO: Regenerating c-file: Tomography.c
DEBUG: CMD: /u/data/pkwi/McStas/mcstas/3.x-dev/bin/mcstas -t -o ./Tomography.c Tomography.instr
CFLAGS=  -DUSE_OFF 
      
-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout: 

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:

-----------------------------------------------------------
DEBUG: CMD: /u/data/pkwi/McStas/mcstas/3.x-dev/bin/mcstas finished
INFO: Recompiling: ./Tomography.out
DEBUG: CMD: nvc -o ./Tomography.out ./Tomography.c -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/lib -Wl,-rpath-link,/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/lib -L/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/lib -mtune=haswell -fPIC -O2 -isystem /u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/include -fast -Minfo=accel -acc=gpu -gpu=managed -DOPENACC -DUSE_OFF
"./Tomography.c", line 4487: warning: variable "num" was declared but never referenced [declared_but_not_referenced]
          int num = 3;
              ^

Remark: individual warnings can be suppressed with "--diag_suppress <warning-name>"

"./Tomography.c", line 8681: warning: variable "minx" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
          ^

"./Tomography.c", line 8681: warning: variable "maxx" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                       ^

"./Tomography.c", line 8681: warning: variable "miny" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                     ^

"./Tomography.c", line 8681: warning: variable "maxy" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                  ^

"./Tomography.c", line 8681: warning: variable "minz" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                                ^

"./Tomography.c", line 8681: warning: variable "maxz" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                                             ^

"./Tomography.c", line 9038: warning: variable "plane_Eq" was declared but never referenced [declared_but_not_referenced]
    double plane_Eq [4];
           ^

"./Tomography.c", line 12113: warning: variable "dt" was set but never used [set_but_not_used]
  	double dt, dy;
  	       ^

"./Tomography.c", line 12113: warning: variable "dy" was set but never used [set_but_not_used]
  	double dt, dy;
  	           ^

"./Tomography.c", line 12140: warning: variable "dx" was set but never used [set_but_not_used]
  	double dx, dy;
  	       ^

"./Tomography.c", line 12140: warning: variable "dy" was set but never used [set_but_not_used]
  	double dx, dy;
  	           ^

"./Tomography.c", line 12462: warning: variable "tc2" was set but never used [set_but_not_used]
      Coords tc1, tc2;
                  ^

"./Tomography.c", line 12450: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 1;
        ^

"./Tomography.c", line 12503: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 2;
        ^

"./Tomography.c", line 12564: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 3;
        ^

"./Tomography.c", line 12613: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 4;
        ^

"./Tomography.c", line 12696: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 5;
        ^

"./Tomography.c", line 13569: warning: variable "l_i" was set but never used [set_but_not_used]
    double l_i, l_o=0;            /* Flight path lenght in/out for scattered neutron */
           ^

"./Tomography.c", line 13569: warning: variable "l_o" was declared but never referenced [declared_but_not_referenced]
    double l_i, l_o=0;            /* Flight path lenght in/out for scattered neutron */
                ^

"./Tomography.c", line 15250: warning: variable "t" was declared but never referenced [declared_but_not_referenced]
    time_t  t;
            ^

"./Tomography.c", line 15251: warning: variable "ct" was set but never used [set_but_not_used]
    clock_t ct;
            ^

"./Tomography.c", line 1495: warning: variable "mcstartdate" was set but never used [set_but_not_used]
  static   long mcstartdate            = 0; /* start simulation time */
                ^

"./Tomography.c", line 2898: warning: function "strcpy_valid" was declared but never referenced [declared_but_not_referenced]
  static char *strcpy_valid(char *valid, char *original)
               ^

mcgenstate:
     88, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar:
    102, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar_void:
    134, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void:
    158, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void_array:
    180, Generating acc routine seq
         Generating NVIDIA GPU code
particle_restore:
    191, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getuservar_byid:
    200, Generating acc routine seq
         Generating NVIDIA GPU code
particle_uservar_init:
    210, Generating acc routine seq
         Generating NVIDIA GPU code
noprintf:
   1542, Generating acc routine seq
         Generating NVIDIA GPU code
str_comp:
   1546, Generating acc routine seq
         Generating NVIDIA GPU code
str_len:
   1555, Generating acc routine seq
         Generating NVIDIA GPU code
mcget_ncount:
   4108, Generating acc routine seq
         Generating NVIDIA GPU code
coords_set:
   4539, Generating acc routine seq
         Generating NVIDIA GPU code
coords_get:
   4550, Generating acc routine seq
         Generating NVIDIA GPU code
coords_add:
   4559, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sub:
   4571, Generating acc routine seq
         Generating NVIDIA GPU code
coords_neg:
   4583, Generating acc routine seq
         Generating NVIDIA GPU code
coords_scale:
   4593, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sp:
   4603, Generating acc routine seq
         Generating NVIDIA GPU code
coords_xp:
   4611, Generating acc routine seq
         Generating NVIDIA GPU code
coords_len:
   4621, Generating acc routine seq
         Generating NVIDIA GPU code
coords_print:
   4643, Generating acc routine seq
         Generating NVIDIA GPU code
coords_norm:
   4650, Generating acc routine seq
         Generating NVIDIA GPU code
rot_set_rotation:
   4696, Generating acc routine seq
         Generating NVIDIA GPU code
rot_test_identity:
   4731, Generating acc routine seq
         Generating NVIDIA GPU code
rot_mul:
   4742, Generating acc routine seq
         Generating NVIDIA GPU code
rot_copy:
   4759, Generating acc routine seq
         Generating NVIDIA GPU code
rot_transpose:
   4770, Generating acc routine seq
         Generating NVIDIA GPU code
rot_apply:
   4786, Generating acc routine seq
         Generating NVIDIA GPU code
vec_prod_func:
   4815, Generating acc routine seq
         Generating NVIDIA GPU code
scalar_prod:
   4826, Generating acc routine seq
         Generating NVIDIA GPU code
norm_func:
   4830, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange:
   5007, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange_polarisation:
   5038, Generating acc routine seq
         Generating NVIDIA GPU code
normal_vec:
   5055, Generating acc routine seq
         Generating NVIDIA GPU code
solve_2nd_order:
   5154, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_circle:
   5238, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_angular:
   5304, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_real:
   5381, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_srandom:
   5653, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_random:
   5663, Generating acc routine seq
         Generating NVIDIA GPU code
_hash:
   5689, Generating acc routine seq
         Generating NVIDIA GPU code
_randnorm2:
   5730, Generating acc routine seq
         Generating NVIDIA GPU code
_randtriangle:
   5741, Generating acc routine seq
         Generating NVIDIA GPU code
_rand01:
   5746, Generating acc routine seq
         Generating NVIDIA GPU code
_randpm1:
   5754, Generating acc routine seq
         Generating NVIDIA GPU code
_rand0max:
   5762, Generating acc routine seq
         Generating NVIDIA GPU code
_randminmax:
   5769, Generating acc routine seq
         Generating NVIDIA GPU code
mcsetstate:
   6428, Generating acc routine seq
         Generating NVIDIA GPU code
mcgetstate:
   6464, Generating acc routine seq
         Generating NVIDIA GPU code
inside_rectangle:
   6524, Generating acc routine seq
         Generating NVIDIA GPU code
box_intersect:
   6541, Generating acc routine seq
         Generating NVIDIA GPU code
cylinder_intersect:
   6656, Generating acc routine seq
         Generating NVIDIA GPU code
sphere_intersect:
   6711, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Index:
   7735, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value:
   7803, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value2d:
   7882, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d:
   8350, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d_nearest:
   8366, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp2d:
   8384, Generating acc routine seq
         Generating NVIDIA GPU code
off_F:
   8638, Generating acc routine seq
         Generating NVIDIA GPU code
off_sign:
   8643, Generating acc routine seq
         Generating NVIDIA GPU code
off_normal:
   8653, Generating acc routine seq
         Generating NVIDIA GPU code
off_pnpoly:
   8679, Generating acc routine seq
         Generating NVIDIA GPU code
off_intersectPoly:
   8742, Generating acc routine seq
         Generating NVIDIA GPU code
off_init_planes:
   8873, Generating acc routine seq
         Generating NVIDIA GPU code
off_clip_3D_mod:
   8918, Generating acc routine seq
         Generating NVIDIA GPU code
off_clip_3D_mod_grav:
   9035, Generating acc routine seq
         Generating NVIDIA GPU code
off_compare:
   9153, Generating acc routine seq
         Generating NVIDIA GPU code
off_cleanDouble:
   9165, Generating acc routine seq
         Generating NVIDIA GPU code
off_cleanInOut:
   9200, Generating acc routine seq
         Generating NVIDIA GPU code
Min_int:
   9451, Generating acc routine seq
         Generating NVIDIA GPU code
merge:
   9458, Generating acc routine seq
         Generating NVIDIA GPU code
gpusort:
   9519, Generating acc routine seq
         Generating NVIDIA GPU code
p_to_quadratic:
   9562, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
quadraticSolve:
   9577, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
off_intersect_all:
   9631, Generating acc routine seq
         Generating NVIDIA GPU code
off_intersect:
   9748, Generating acc routine seq
         Generating NVIDIA GPU code
off_x_intersect:
   9770, Generating acc routine seq
         Generating NVIDIA GPU code
Monitor_nD_Trace:
  11094, Generating acc routine seq
         Generating NVIDIA GPU code
init:
  13298, Generating update device(_source_var,_samplearm_var,_sample_var,_monitor_var,_instrument_var,_Origin_var)
class_Progress_bar_trace:
  13341, Generating acc routine seq
         Generating NVIDIA GPU code
class_Source_div_trace:
  13431, Generating acc routine seq
         Generating NVIDIA GPU code
class_Incoherent_trace:
  13529, Generating acc routine seq
         Generating NVIDIA GPU code
  13726, Reference argument passing prevents parallelization: solid_angle
  13729, Reference argument passing prevents parallelization: solid_angle
class_Monitor_nD_trace:
  13828, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace:
  14122, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace_all:
  14266, Generating implicit firstprivate(gpu_innerloop)
         Generating NVIDIA GPU code
      14280, #pragma acc loop gang(numgangs), vector(vecsize) /* blockIdx.x threadIdx.x */
  14266, Local memory used for .inl_particle_12553,particleN,.inl_.inl_mcneutron_0_12568,.inl_.X2062_12570,.inl_.inl_.X2264_15_12569
  14280, Generating implicit firstprivate(seed,_particle)
finally:
  14728, Generating update self(_source_var,_samplearm_var,_sample_var,_monitor_var,_instrument_var,_Origin_var)
mcenabletrace:
   5888, Generating update device(mcdotrace)
/u/data/pkwi/McStas/mcstas/3.x-dev/tools/../miniconda3/bin//ld: warning: /tmp/pgcudafat_DYte63wwcNKb.o: missing .note.GNU-stack section implies executable stack
/u/data/pkwi/McStas/mcstas/3.x-dev/tools/../miniconda3/bin//ld: NOTE: This behaviour is deprecated and will be removed in a future version of the linker
DEBUG: CMD: nvc finished
INFO: ===