INFO: No output directory specified (--dir)
INFO: Using directory: "linup-1_20250514_142003"
INFO: Regenerating c-file: linup-1.c
DEBUG: CMD: /gpfs/hpc/apps/CentOS8_2/mcstas/3.5.29/bin/mcstas -t -o ./linup-1.c linup-1.instr
CFLAGS=

-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout: 

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:

-----------------------------------------------------------
DEBUG: CMD: /gpfs/hpc/apps/CentOS8_2/mcstas/3.5.29/bin/mcstas finished
INFO: Recompiling: ./linup-1.out
DEBUG: CMD: nvc -o ./linup-1.out ./linup-1.c -lm -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/gpfs/hpc/apps/CentOS8_2/mcstas/3.5.29/lib -Wl,-rpath-link,/gpfs/hpc/apps/CentOS8_2/mcstas/3.5.29/lib -L/gpfs/hpc/apps/CentOS8_2/mcstas/3.5.29/lib -mtune=haswell -fPIC -O2 -isystem /gpfs/hpc/apps/CentOS8_2/mcstas/3.5.29/include -fast -Minfo=accel -acc=gpu -gpu=managed -DOPENACC
"./linup-1.c", line 4571: warning: variable "num" was declared but never referenced [declared_but_not_referenced]
          int num = 3;
              ^

Remark: individual warnings can be suppressed with "--diag_suppress <warning-name>"

"./linup-1.c", line 6272: warning: variable "status" was set but never used [set_but_not_used]
        int status;
            ^

"./linup-1.c", line 7376: warning: variable "tc2" was set but never used [set_but_not_used]
      Coords tc1, tc2;
                  ^

"./linup-1.c", line 7364: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 1;
        ^

"./linup-1.c", line 7421: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 2;
        ^

"./linup-1.c", line 7498: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 3;
        ^

"./linup-1.c", line 7563: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 4;
        ^

"./linup-1.c", line 7628: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 5;
        ^

"./linup-1.c", line 7693: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 6;
        ^

"./linup-1.c", line 7742: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 7;
        ^

"./linup-1.c", line 7815: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 8;
        ^

"./linup-1.c", line 7888: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 9;
        ^

"./linup-1.c", line 7961: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 10;
        ^

"./linup-1.c", line 8034: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 11;
        ^

"./linup-1.c", line 8107: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 12;
        ^

"./linup-1.c", line 8180: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 13;
        ^

"./linup-1.c", line 8253: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 14;
        ^

"./linup-1.c", line 8326: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 15;
        ^

"./linup-1.c", line 8375: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 16;
        ^

"./linup-1.c", line 8440: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 17;
        ^

"./linup-1.c", line 8505: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 18;
        ^

"./linup-1.c", line 8576: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 19;
        ^

"./linup-1.c", line 8641: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 20;
        ^

"./linup-1.c", line 8706: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 21;
        ^

"./linup-1.c", line 8771: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 22;
        ^

"./linup-1.c", line 8849: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 23;
        ^

"./linup-1.c", line 8898: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 24;
        ^

"./linup-1.c", line 8963: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 25;
        ^

"./linup-1.c", line 12238: warning: variable "t" was declared but never referenced [declared_but_not_referenced]
    time_t  t;
            ^

"./linup-1.c", line 12239: warning: variable "ct" was set but never used [set_but_not_used]
    clock_t ct;
            ^

"./linup-1.c", line 1508: warning: variable "mcstartdate" was set but never used [set_but_not_used]
  static   long mcstartdate            = 0; /* start simulation time */
                ^

"./linup-1.c", line 2928: warning: function "strcpy_valid" was declared but never referenced [declared_but_not_referenced]
  static char *strcpy_valid(char *valid, char *original)
               ^

mcgenstate:
    102, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar:
    116, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar_void:
    148, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void:
    172, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void_array:
    194, Generating acc routine seq
         Generating NVIDIA GPU code
particle_restore:
    205, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getuservar_byid:
    214, Generating acc routine seq
         Generating NVIDIA GPU code
particle_uservar_init:
    224, Generating acc routine seq
         Generating NVIDIA GPU code
noprintf:
   1556, Generating acc routine seq
         Generating NVIDIA GPU code
str_comp:
   1560, Generating acc routine seq
         Generating NVIDIA GPU code
str_len:
   1569, Generating acc routine seq
         Generating NVIDIA GPU code
mcget_ncount:
   4192, Generating acc routine seq
         Generating NVIDIA GPU code
coords_set:
   4623, Generating acc routine seq
         Generating NVIDIA GPU code
coords_get:
   4634, Generating acc routine seq
         Generating NVIDIA GPU code
coords_add:
   4643, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sub:
   4655, Generating acc routine seq
         Generating NVIDIA GPU code
coords_neg:
   4667, Generating acc routine seq
         Generating NVIDIA GPU code
coords_scale:
   4677, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sp:
   4687, Generating acc routine seq
         Generating NVIDIA GPU code
coords_xp:
   4695, Generating acc routine seq
         Generating NVIDIA GPU code
coords_len:
   4705, Generating acc routine seq
         Generating NVIDIA GPU code
coords_print:
   4727, Generating acc routine seq
         Generating NVIDIA GPU code
coords_norm:
   4734, Generating acc routine seq
         Generating NVIDIA GPU code
rot_set_rotation:
   4780, Generating acc routine seq
         Generating NVIDIA GPU code
rot_test_identity:
   4815, Generating acc routine seq
         Generating NVIDIA GPU code
rot_mul:
   4826, Generating acc routine seq
         Generating NVIDIA GPU code
rot_copy:
   4843, Generating acc routine seq
         Generating NVIDIA GPU code
rot_transpose:
   4854, Generating acc routine seq
         Generating NVIDIA GPU code
rot_apply:
   4870, Generating acc routine seq
         Generating NVIDIA GPU code
vec_prod_func:
   4899, Generating acc routine seq
         Generating NVIDIA GPU code
scalar_prod:
   4910, Generating acc routine seq
         Generating NVIDIA GPU code
norm_func:
   4914, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange:
   5091, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange_polarisation:
   5122, Generating acc routine seq
         Generating NVIDIA GPU code
normal_vec:
   5139, Generating acc routine seq
         Generating NVIDIA GPU code
solve_2nd_order:
   5238, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_circle:
   5322, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_angular:
   5388, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_real:
   5465, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_srandom:
   5737, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_random:
   5749, Generating acc routine seq
         Generating NVIDIA GPU code
_hash:
   5781, Generating acc routine seq
         Generating NVIDIA GPU code
_randnorm2:
   5822, Generating acc routine seq
         Generating NVIDIA GPU code
_randtriangle:
   5833, Generating acc routine seq
         Generating NVIDIA GPU code
_rand01:
   5838, Generating acc routine seq
         Generating NVIDIA GPU code
_randpm1:
   5846, Generating acc routine seq
         Generating NVIDIA GPU code
_rand0max:
   5854, Generating acc routine seq
         Generating NVIDIA GPU code
_randminmax:
   5861, Generating acc routine seq
         Generating NVIDIA GPU code
mcsetstate:
   6541, Generating acc routine seq
         Generating NVIDIA GPU code
mcgetstate:
   6578, Generating acc routine seq
         Generating NVIDIA GPU code
inside_rectangle:
   6638, Generating acc routine seq
         Generating NVIDIA GPU code
box_intersect:
   6655, Generating acc routine seq
         Generating NVIDIA GPU code
cylinder_intersect:
   6770, Generating acc routine seq
         Generating NVIDIA GPU code
sphere_intersect:
   6825, Generating acc routine seq
         Generating NVIDIA GPU code
init:
   9545, Generating update device(_source_var,_sng_var,_m7_var,_slit1_var,_slit2_var,_emon1_var,_instrument_var,_m0_var,_m1_var,_m2_var,_m3_var,_m4_var,_m5_var,_m6_var,_a1_var,_slit3_var,_slitMS1_var,_a3_var,_slitMS2_var,_slitMS3_var,_slitMS4_var,_c1_var,_a2_var,_slitMS5_var,_slitS_var,_focus_mono_var)
class_Progress_bar_trace:
   9588, Generating acc routine seq
         Generating NVIDIA GPU code
class_Source_simple_trace:
   9678, Generating acc routine seq
         Generating NVIDIA GPU code
class_Slit_trace:
   9781, Generating acc routine seq
         Generating NVIDIA GPU code
class_Monochromator_flat_trace:
   9825, Generating acc routine seq
         Generating NVIDIA GPU code
class_Collimator_linear_trace:
  10010, Generating acc routine seq
         Generating NVIDIA GPU code
class_E_monitor_trace:
  10084, Generating acc routine seq
         Generating NVIDIA GPU code
class_Monitor_trace:
  10171, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace:
  10233, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace_all:
  10765, Generating implicit firstprivate(gpu_innerloop)
         Generating NVIDIA GPU code
      10779, #pragma acc loop gang(numgangs), vector(vecsize) /* blockIdx.x threadIdx.x */
  10765, Local memory used for .inl_particle_15918,particleN,.inl_.inl_mcneutron_0_15933,.inl_.X1873_15935,.inl_.inl_.X2064_15_15934
  10779, Generating implicit firstprivate(seed,_particle)
finally:
  11546, Generating update self(_source_var,_sng_var,_m7_var,_slit1_var,_slit2_var,_emon1_var,_instrument_var,_m0_var,_m1_var,_m2_var,_m3_var,_m4_var,_m5_var,_m6_var,_a1_var,_slit3_var,_slitMS1_var,_a3_var,_slitMS2_var,_slitMS3_var,_slitMS4_var,_c1_var,_a2_var,_slitMS5_var,_slitS_var,_focus_mono_var)
mcenabletrace:
   5981, Generating update device(mcdotrace)
/gpfs/hpc/apps/CentOS8_2/mcstas/3.5.29/bin/ld: warning: /tmp/pgcudafatHUJ6iJvsi4aNX.o: missing .note.GNU-stack section implies executable stack
/gpfs/hpc/apps/CentOS8_2/mcstas/3.5.29/bin/ld: NOTE: This behaviour is deprecated and will be removed in a future version of the linker
DEBUG: CMD: nvc finished
INFO: ===