INFO: Using directory: "1" INFO: Using existing c-file: ./Unittest_SANS_benchmark2.c INFO: Using existing binary: ./Unittest_SANS_benchmark2.out INFO: === Simulation 'Unittest_SANS_benchmark2' (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr): running on 16 nodes (master is 'elearn1.fysik.dtu.dk', MPI version 3.1). [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize [Unittest_SANS_benchmark2] Initialize *** TRACE end *** Save [Unittest_SANS_benchmark2] Detector: Sample_in_I=68.5114 Sample_in_ERR=0.0489028 Sample_in_N=1.96272e+06 "SamplePos.dat" Detector: detector_I=67.6251 detector_ERR=0.0482625 detector_N=1.44947e+07 "PSD.dat" Detector: detectorSANS_I=0.0123188 detectorSANS_ERR=8.29205e-06 detectorSANS_N=1.25321e+07 "SANS.dat" Detector: detectorDB_I=67.6128 detectorDB_ERR=0.0482625 detectorDB_N=1.96263e+06 "Direct.dat" Detector: Ldetector_I=67.6251 Ldetector_ERR=0.0482625 Ldetector_N=1.44889e+07 "Edet.dat" Detector: PSDrad_I=0.010305 PSDrad_ERR=6.99211e-06 PSDrad_N=1.23262e+07 "psd2.dat" Detector: PSDrad_I=4.1083 PSDrad_ERR=0.0019886 PSDrad_N=1.97219e+08 "psd2_av.dat" Detector: PSDrad_full_I=67.6231 PSDrad_full_ERR=0.0482625 PSDrad_full_N=1.42888e+07 "psd2_full.dat" Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Detector: PSDrad_full_I=663255 PSDrad_full_ERR=617.218 PSDrad_full_N=2.28621e+08 "psd2_av_full.dat" Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] Finally [Unittest_SANS_benchmark2: 1]. Time: 2 [s] free(): invalid next size (fast) free(): invalid next size (fast) free(): invalid next size (fast) # McStas: [pid 2725171] Signal 6 detected [proc 12] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725167] Signal 6 detected [proc 8] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # Last I/O Error: Numerical result out of range # Last I/O Error: Numerical result out of range # Last I/O Error: Numerical result out of range free(): invalid next size (fast) # McStas: [pid 2725170] Signal 6 detected [proc 11] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725159] Signal 6 detected [proc 0] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) free(): invalid next size (fast) free(): invalid next size (fast) # Last I/O Error: Numerical result out of range free(): invalid next size (fast) # Last I/O Error: Numerical result out of range free(): invalid next size (fast) # Last I/O Error: Numerical result out of range free(): invalid next size (fast) # Last I/O Error: Numerical result out of range free(): invalid next size (fast) # Last I/O Error: Numerical result out of range free(): invalid next size (fast) # Last I/O Error: Numerical result out of range free(): invalid next size (fast) # Last I/O Error: Numerical result out of range free(): invalid next size (fast) # Last I/O Error: Numerical result out of range # Last I/O Error: No such file or directory # Last I/O Error: Numerical result out of range # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725160] Signal 6 detected [proc 1] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725163] Signal 6 detected [proc 4] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725166] Signal 6 detected [proc 7] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725162] Signal 6 detected [proc 3] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725165] Signal 6 detected [proc 6] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725174] Signal 6 detected [proc 15] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725168] Signal 6 detected [proc 9] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725169] Signal 6 detected [proc 10] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725172] Signal 6 detected [proc 13] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). free(): invalid next size (fast) free(): invalid next size (fast) free(): invalid next size (fast) # Last I/O Error: Numerical result out of range # Last I/O Error: Numerical result out of range # Last I/O Error: Numerical result out of range # McStas: [pid 2725164] Signal 6 detected [proc 5] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725161] Signal 6 detected [proc 2] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). # McStas: [pid 2725173] Signal 6 detected [proc 14] SIGABRT (Abort) # Simulation: Unittest_SANS_benchmark2 (/home/nexmap/pkwi/TESTS/2025-05-14/ANTLR_mpi_x_16_1e7_Linux_1e7/Unittest_SANS_benchmark2/Unittest_SANS_benchmark2.instr) # Breakpoint: [_PSD_monitor_rad_finally] component NULL=PSD_monitor_rad() [/home/nexmap/pkwi/McStas/mcstas/3.x-dev/contrib/PSD_monitor_rad.comp:132] 0.00 % ( 0.0/ 625000.0) # Date: Wed May 14 09:30:22 2025 # Started: Wed May 14 09:30:20 2025 # McStas: Simulation stop (abort). -------------------------------------------------------------------------- prterun noticed that process rank 15 with PID 2725174 on node elearn1 exited on signal 3 (Quit). -------------------------------------------------------------------------- INFO: call to mpirun failed with Command 'mpirun -np 16 ./Unittest_SANS_benchmark2.out --trace=0 --seed=1000 --ncount=10000000.0 --dir=1 --format=McCode --bufsiz=10000000 modnum=1' returned non-zero exit status 131. Traceback (most recent call last): File "/home/nexmap/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/mcrun.py", line 616, in main() File "/home/nexmap/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/mcrun.py", line 588, in main mcstas.run() # in mccode.py ^^^^^^^^^^^^ File "/home/nexmap/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/mccode.py", line 347, in run return self.runMPI(args, pipe, override_mpi) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/nexmap/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/mccode.py", line 401, in runMPI return Process(binpath).run(args, pipe=pipe) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/nexmap/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/mccode.py", line 77, in run raise err File "/home/nexmap/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/mccode.py", line 73, in run proc = run(command, shell=True, check=True, text=True, capture_output=pipe) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/nexmap/pkwi/McStas/mcstas/3.x-dev/miniconda3/lib/python3.12/subprocess.py", line 571, in run raise CalledProcessError(retcode, process.args, subprocess.CalledProcessError: Command 'mpirun -np 16 ./Unittest_SANS_benchmark2.out --trace=0 --seed=1000 --ncount=10000000.0 --dir=1 --format=McCode --bufsiz=10000000 modnum=1' returned non-zero exit status 131.