INFO: No output directory specified (--dir) INFO: Using directory: "NCrystal_example_20241206_122427" INFO: Regenerating c-file: NCrystal_example.c DEBUG: CMD: /u/data/pkwi/McStas/mcstas/3.x-dev/bin/mcstas-antlr -t -o ./NCrystal_example.c NCrystal_example.instr Downloading file 'mcstas-comps/contrib/NCrystal_sample.comp' from 'https://github.com/McStasMcXtrace/McCode/raw/v3.5.14/mcstas-comps/contrib/NCrystal_sample.comp' to '/home/nexmap/pkwi/.cache/mcstas/v3.5.14'. Downloading file 'mcstas-comps/monitors/Cyl_monitor.comp' from 'https://github.com/McStasMcXtrace/McCode/raw/v3.5.14/mcstas-comps/monitors/Cyl_monitor.comp' to '/home/nexmap/pkwi/.cache/mcstas/v3.5.14'. No initialization present? ----------------------------------------------------------- Generating single GPU kernel or single CPU section layout: -> SPLIT 10 at component monochromator -> SPLIT 10 at component powder_sample ----------------------------------------------------------- Generating GPU/CPU -DFUNNEL layout: -> GPU kernel from component origin -> GPU kernel from component source -> GPU kernel from component mono_arm Component monochromator is NOACC, CPUONLY=False ->FUNNEL mode enabled, SPLIT within buffer. -> SPLIT within buffer at component monochromator -> GPU kernel from component mono_out Component powder_sample is NOACC, CPUONLY=False ->FUNNEL mode enabled, SPLIT within buffer. -> SPLIT within buffer at component powder_sample -> GPU kernel from component powder_pattern_detc ----------------------------------------------------------- DEBUG: CMD: /u/data/pkwi/McStas/mcstas/3.x-dev/bin/mcstas-antlr finished INFO: Recompiling: ./NCrystal_example.out --> launching cmd: ncrystal-config --show libdir --> launching cmd: ncrystal-config --show libpath --> launching cmd: ncrystal-config --show includedir DEBUG: CMD: nvc -o ./NCrystal_example.out ./NCrystal_example.c -fast -Minfo=accel -acc=gpu -gpu=managed -DOPENACC -Wl,-rpath,/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/lib -Wl,/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/lib/libNCrystal.so.3.8.2 -I/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/include "./NCrystal_example.c", line 4489: warning: variable "num" was declared but never referenced [declared_but_not_referenced] int num = 3; ^ Remark: individual warnings can be suppressed with "--diag_suppress " "./NCrystal_example.c", line 6890: warning: missing return statement at end of non-void function "ncrystalsample_surfintersect" [implicit_return_from_non_void_function] } ^ "./NCrystal_example.c", line 7130: warning: variable "tc2" was set but never used [set_but_not_used] Coords tc1, tc2; ^ "./NCrystal_example.c", line 8108: warning: variable "j" was declared but never referenced [declared_but_not_referenced] int i, j; ^ "./NCrystal_example.c", line 9261: warning: variable "t" was declared but never referenced [declared_but_not_referenced] time_t t; ^ "./NCrystal_example.c", line 9262: warning: variable "ct" was set but never used [set_but_not_used] clock_t ct; ^ "./NCrystal_example.c", line 1498: warning: variable "mcstartdate" was set but never used [set_but_not_used] static long mcstartdate = 0; /* start simulation time */ ^ "./NCrystal_example.c", line 2901: warning: function "strcpy_valid" was declared but never referenced [declared_but_not_referenced] static char *strcpy_valid(char *valid, char *original) ^ mcgenstate: 89, Generating acc routine seq Generating NVIDIA GPU code particle_getvar: 103, Generating acc routine seq Generating NVIDIA GPU code particle_getvar_void: 136, Generating acc routine seq Generating NVIDIA GPU code particle_setvar_void: 161, Generating acc routine seq Generating NVIDIA GPU code particle_setvar_void_array: 184, Generating acc routine seq Generating NVIDIA GPU code particle_restore: 196, Generating acc routine seq Generating NVIDIA GPU code particle_getuservar_byid: 205, Generating acc routine seq Generating NVIDIA GPU code particle_uservar_init: 216, Generating acc routine seq Generating NVIDIA GPU code noprintf: 1545, Generating acc routine seq Generating NVIDIA GPU code str_comp: 1549, Generating acc routine seq Generating NVIDIA GPU code str_len: 1558, Generating acc routine seq Generating NVIDIA GPU code mcget_ncount: 4110, Generating acc routine seq Generating NVIDIA GPU code coords_set: 4541, Generating acc routine seq Generating NVIDIA GPU code coords_get: 4552, Generating acc routine seq Generating NVIDIA GPU code coords_add: 4561, Generating acc routine seq Generating NVIDIA GPU code coords_sub: 4573, Generating acc routine seq Generating NVIDIA GPU code coords_neg: 4585, Generating acc routine seq Generating NVIDIA GPU code coords_scale: 4595, Generating acc routine seq Generating NVIDIA GPU code coords_sp: 4605, Generating acc routine seq Generating NVIDIA GPU code coords_xp: 4613, Generating acc routine seq Generating NVIDIA GPU code coords_len: 4623, Generating acc routine seq Generating NVIDIA GPU code coords_print: 4645, Generating acc routine seq Generating NVIDIA GPU code coords_norm: 4652, Generating acc routine seq Generating NVIDIA GPU code rot_set_rotation: 4698, Generating acc routine seq Generating NVIDIA GPU code rot_test_identity: 4733, Generating acc routine seq Generating NVIDIA GPU code rot_mul: 4744, Generating acc routine seq Generating NVIDIA GPU code rot_copy: 4761, Generating acc routine seq Generating NVIDIA GPU code rot_transpose: 4772, Generating acc routine seq Generating NVIDIA GPU code rot_apply: 4788, Generating acc routine seq Generating NVIDIA GPU code vec_prod_func: 4817, Generating acc routine seq Generating NVIDIA GPU code scalar_prod: 4828, Generating acc routine seq Generating NVIDIA GPU code norm_func: 4832, Generating acc routine seq Generating NVIDIA GPU code mccoordschange: 5009, Generating acc routine seq Generating NVIDIA GPU code mccoordschange_polarisation: 5040, Generating acc routine seq Generating NVIDIA GPU code normal_vec: 5057, Generating acc routine seq Generating NVIDIA GPU code solve_2nd_order: 5156, Generating acc routine seq Generating NVIDIA GPU code _randvec_target_circle: 5240, Generating acc routine seq Generating NVIDIA GPU code _randvec_target_rect_angular: 5306, Generating acc routine seq Generating NVIDIA GPU code _randvec_target_rect_real: 5383, Generating acc routine seq Generating NVIDIA GPU code kiss_srandom: 5655, Generating acc routine seq Generating NVIDIA GPU code kiss_random: 5665, Generating acc routine seq Generating NVIDIA GPU code _hash: 5691, Generating acc routine seq Generating NVIDIA GPU code _randnorm2: 5732, Generating acc routine seq Generating NVIDIA GPU code _randtriangle: 5743, Generating acc routine seq Generating NVIDIA GPU code _rand01: 5748, Generating acc routine seq Generating NVIDIA GPU code _randpm1: 5756, Generating acc routine seq Generating NVIDIA GPU code _rand0max: 5764, Generating acc routine seq Generating NVIDIA GPU code _randminmax: 5771, Generating acc routine seq Generating NVIDIA GPU code mcsetstate: 6428, Generating acc routine seq Generating NVIDIA GPU code inside_rectangle: 6524, Generating acc routine seq Generating NVIDIA GPU code box_intersect: 6541, Generating acc routine seq Generating NVIDIA GPU code cylinder_intersect: 6656, Generating acc routine seq Generating NVIDIA GPU code sphere_intersect: 6711, Generating acc routine seq Generating NVIDIA GPU code ncrystalsample_surfintersect: 6881, Generating implicit acc routine seq Generating acc routine seq Generating NVIDIA GPU code init: 7701, Generating update device(_monochromator_var,_source_var,_powder_sample_var,_instrument_var,_mono_out_var,_mono_arm_var,_powder_pattern_detc_var,_origin_var) class_Progress_bar_trace: 7742, Generating acc routine seq Generating NVIDIA GPU code class_Source_div_trace: 7832, Generating acc routine seq Generating NVIDIA GPU code class_NCrystal_sample_trace: 7931, Generating acc routine seq Generating NVIDIA GPU code 8035, Reference argument passing prevents parallelization: xsect_abs 8037, Reference argument passing prevents parallelization: xsect_scat class_Cyl_monitor_trace: 8093, Generating acc routine seq Generating NVIDIA GPU code raytrace: 8175, Generating acc routine seq Generating NVIDIA GPU code raytrace_all: 8377, Generating implicit firstprivate(gpu_innerloop) Generating NVIDIA GPU code 8391, #pragma acc loop gang(numgangs), vector(vecsize) /* blockIdx.x threadIdx.x */ 8377, Local memory used for .inl_particle_9394,particleN,.inl_.inl_mcneutron_0_9409,.inl_.X1826_9411,.inl_.inl_.X2018_15_9410 8391, Generating implicit firstprivate(seed,_particle) finally: 8844, Generating update self(_monochromator_var,_source_var,_powder_sample_var,_instrument_var,_mono_out_var,_mono_arm_var,_powder_pattern_detc_var,_origin_var) mcenabletrace: 5890, Generating update device(mcdotrace) nvlink error : Undefined reference to 'ncrystal_samplescatter' in '/tmp/nvcnzvwmNVx4qo4J.o' nvlink error : Undefined reference to 'ncrystal_crosssection_nonoriented' in '/tmp/nvcnzvwmNVx4qo4J.o' nvlink error : Undefined reference to 'ncrystal_crosssection' in '/tmp/nvcnzvwmNVx4qo4J.o' pgacclnk: child process exit status 2: /opt/nvidia/hpc_sdk/Linux_x86_64/24.7/compilers/bin/tools/nvdd INFO: call to nvc failed with Command 'nvc -o ./NCrystal_example.out ./NCrystal_example.c -fast -Minfo=accel -acc=gpu -gpu=managed -DOPENACC -Wl,-rpath,/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/lib -Wl,/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/lib/libNCrystal.so.3.8.2 -I/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/include' returned non-zero exit status 2. Traceback (most recent call last): File "/u/data/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/mcrun.py", line 595, in main() File "/u/data/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/mcrun.py", line 503, in main mcstas.prepare(options) File "/u/data/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/mccode.py", line 294, in prepare Process(lexer.quote(options.cc)).run(args) File "/u/data/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/mccode.py", line 77, in run raise err File "/u/data/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/mccode.py", line 73, in run proc = run(command, shell=True, check=True, text=True, capture_output=pipe) File "/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/lib/python3.10/subprocess.py", line 526, in run raise CalledProcessError(retcode, process.args, subprocess.CalledProcessError: Command 'nvc -o ./NCrystal_example.out ./NCrystal_example.c -fast -Minfo=accel -acc=gpu -gpu=managed -DOPENACC -Wl,-rpath,/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/lib -Wl,/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/lib/libNCrystal.so.3.8.2 -I/u/data/pkwi/McStas/mcstas/3.x-dev/miniconda3/include' returned non-zero exit status 2.