INFO: Using directory: "1"
INFO: Using existing c-file: ./Test_absorption.c
INFO: Using existing binary: ./Test_absorption.out
INFO: ===
Simulation 'Test_absorption' (Test_absorption.instr): running on 16 nodes (master is 'elearn1.fysik.dtu.dk', MPI version 3.1).
Instrument parameters for Test_absorption (Test_absorption.instr)
[Test_absorption] Initialize
[Test_absorption] Initialize
[Test_absorption] Initialize
[Test_absorption] Initialize
[Test_absorption] Initialize
---------------------------------------------------------------------
global_process_list_master->num_elements: 0
---------------------------------------------------------------------
global_material_list_master->num_elements: 1
name of material    [0]: absorber_material 
component index     [0]: 2 
my_absoprtion       [0]: 3.000000 
number of processes [0]: 0 
---------------------------------------------------------------------
[Test_absorption] Initialize
global_geometry_list_master->num_elements: 1

name of geometry    [0]: cylinder 
component index     [0]: 6 
Volume.name         [0]: cylinder 
Volume.p_physics.is_vacuum           [0]: 0 
Volume.p_physics.my_absorption       [0]: 3.000000 
Volume.p_physics.number of processes [0]: 0 
[Test_absorption] Initialize
Volume.geometry.shape                [0]: cylinder 
Volume.geometry.center.x             [0]: 0.000000 
Volume.geometry.center.y             [0]: 0.000000 
Volume.geometry.center.z             [0]: 1.400000 
Volume.geometry.rotation_matrix[0]           [0]: [1.000000 0.000000 0.000000] 
Volume.geometry.rotation_matrix[1]           [0]: [0.000000 1.000000 0.000000] 
[Test_absorption] Initialize
[Test_absorption] Initialize
Volume.geometry.rotation_matrix[2]           [0]: [0.000000 0.000000 1.000000] 
Volume.geometry.geometry_parameters.cyl_radius [0]: 0.050000 
Volume.geometry.geometry_parameters.height [0]: 0.100000 
Volume.geometry.focus_data_array.elements[0].Aim             [0]: [0.000000 0.000000 1.000000] 
[Test_absorption] Initialize
---------------------------------------------------------------------
number_of_volumes = 2
number_of_masks = 0
number_of_masked_volumes = 0

 ---- Overview of the lists generated for each volume ---- 
List overview for surrounding vacuum
LIST: Children for Volume                  0 = [1]
LIST: Direct_children for Volume           0 = [1]
LIST: Intersect_check_list for Volume      0 = [1]
LIST: Mask_intersect_list for Volume       0 = []
LIST: Destinations_list for Volume         0 = []
LIST: Reduced_destinations_list for Volume 0 = []
LIST: Next_volume_list for Volume          0 = [1]
LIST: mask_list for Volume                 0 = []
LIST: masked_by_list for Volume            0 = []
LIST: masked_by_mask_index_list for Volume 0 = []
      mask_mode for Volume                 0 = 0

List overview for cylinder with cylinder shape made of absorber_material
LIST: Children for Volume                  1 = []
LIST: Direct_children for Volume           1 = []
LIST: Intersect_check_list for Volume      1 = []
LIST: Mask_intersect_list for Volume       1 = []
LIST: Destinations_list for Volume         1 = [0]
LIST: Reduced_destinations_list for Volume 1 = []
LIST: Next_volume_list for Volume          1 = [0]
      Is_vacuum for Volume                 1 = 0
      is_mask_volume for Volume            1 = 0
[Test_absorption] Initialize
[Test_absorption] Initialize
      is_masked_volume for Volume          1 = 0
      is_exit_volume for Volume            1 = 0
LIST: mask_list for Volume                 1 = []
LIST: masked_by_list for Volume            1 = []
LIST: masked_by_mask_index_list for Volume 1 = []
      mask_mode for Volume                 1 = 0

Union_master component test_sample initialized sucessfully
[Test_absorption] Initialize
[Test_absorption] Initialize
[Test_absorption] Initialize
[Test_absorption] Initialize
*** TRACE end *** 

Save [Test_absorption]

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Detector: screen_I=5.91393e-06 screen_ERR=1.9028e-09 screen_N=1e+07 "absoprtion_picture.dat"

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INFO: Placing instr file copy Test_absorption.instr in dataset 1
INFO: Placing generated c-code copy Test_absorption.c in dataset 1