loading system configuration loading user configuration from /users/willend/.mcstas/3.x-dev/mccode_config.json loading override configuration from /users/willend/McCode/tools/Python/mctest/../mccodelib/mcstas-test/McStas_DUAL_A100_DMSC/mccode_config.json INFO: No output directory specified (--dir) INFO: Using directory: "NCrystal_example_20230201_011818" INFO: Regenerating c-file: NCrystal_example.c DEBUG: CMD: mcstas -t -o ./NCrystal_example.c /users/willend/TESTS/2023-02-01/McStas_DUAL_A100_DMSC_5e7/NCrystal_example/NCrystal_example.instr Info: 'NCrystal_sample' is a contributed component. CFLAGS= -Wl,-rpath,CMD(ncrystal-config --show libdir) -LCMD(ncrystal-config --show libdir) -lNCrystal -ICMD(ncrystal-config --show includedir) -DFUNNEL ----------------------------------------------------------- Generating single GPU kernel or single CPU section layout: ----------------------------------------------------------- Generating GPU/CPU -DFUNNEL layout: Component monochromator is NOACC, CPUONLY=1 -> FUNNEL mode enabled, SPLIT within buffer. -> CPU section from component monochromator -> GPU kernel from component mono_out Component powder_sample is NOACC, CPUONLY=1 -> FUNNEL mode enabled, SPLIT within buffer. -> CPU section from component powder_sample -> GPU kernel from component powder_pattern_detc ----------------------------------------------------------- INFO: Recompiling: ./NCrystal_example.out --> launching cmd: ncrystal-config --show libdir --> launching cmd: ncrystal-config --show libdir --> launching cmd: ncrystal-config --show includedir DEBUG: CMD: nvc -o ./NCrystal_example.out ./NCrystal_example.c -lm -DUSE_MPI -lmpi -L/mnt/groupdata/apps/CentOS8_2/nvhpc/hpc_sdk/Linux_x86_64/21.2/comm_libs/mpi/lib -I/mnt/groupdata/apps/CentOS8_2/nvhpc/hpc_sdk/Linux_x86_64/21.2/comm_libs/mpi/include -ta:tesla,managed -DOPENACC -Minfo:accel -Wl,-rpath,/users/willend/McStas/mcstas/3.x-dev/lib -L/users/willend/McStas/mcstas/3.x-dev/lib -lNCrystal -I/users/willend/McStas/mcstas/3.x-dev/include -DFUNNEL "./NCrystal_example.c", line 1648: warning: arithmetic on pointer to void or function type if (MPI_Send((void*)(sbuf+offset*dsize), length, dtype, dest, tag++, MPI_COMM_WORLD) != MPI_SUCCESS) ^ "./NCrystal_example.c", line 1675: warning: arithmetic on pointer to void or function type if (MPI_Recv((void*)(sbuf+offset*dsize), length, dtype, source, tag++, ^ "./NCrystal_example.c", line 3393: warning: missing return statement at end of non-void function "siminfo_init" } /* siminfo_init */ ^ "./NCrystal_example.c", line 4324: warning: variable "randstate" was declared but never referenced unsigned long randstate[7]; ^ "./NCrystal_example.c", line 4243: warning: variable "newlen" was declared but never referenced long newlen = 0; ^ "./NCrystal_example.c", line 6219: warning: missing return statement at end of non-void function "ncrystalsample_surfintersect" } ^ "./NCrystal_example.c", line 8219: warning: variable "dt" was set but never used double dt, dy; ^ "./NCrystal_example.c", line 8219: warning: variable "dy" was set but never used double dt, dy; ^ "./NCrystal_example.c", line 8246: warning: variable "dx" was set but never used double dx, dy; ^ "./NCrystal_example.c", line 8246: warning: variable "dy" was set but never used double dx, dy; ^ "./NCrystal_example.c", line 10053: warning: variable "minx" was declared but never referenced MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX; ^ "./NCrystal_example.c", line 10053: warning: variable "maxx" was declared but never referenced MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX; ^ "./NCrystal_example.c", line 10053: warning: variable "miny" was declared but never referenced MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX; ^ "./NCrystal_example.c", line 10053: warning: variable "maxy" was declared but never referenced MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX; ^ "./NCrystal_example.c", line 10053: warning: variable "minz" was declared but never referenced MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX; ^ "./NCrystal_example.c", line 10053: warning: variable "maxz" was declared but never referenced MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX; ^ "./NCrystal_example.c", line 10409: warning: variable "plane_Eq" was declared but never referenced double plane_Eq [4]; ^ "./NCrystal_example.c", line 11396: warning: controlling expression is constant if("NULL" && strlen("NULL")) ^ "./NCrystal_example.c", line 11397: warning: controlling expression is constant stracpy(_origin_var._parameters.profile, "NULL" ? "NULL" : "", 16384); ^ "./NCrystal_example.c", line 11407: warning: variable "tc2" was set but never used Coords tc1, tc2; ^ "./NCrystal_example.c", line 11523: warning: controlling expression is constant if("Ge_sg227.ncmat;mos=0.3deg;incoh_elas=0;inelas=0" ";dir1=@crys_hkl:5,1,1@lab:0,0,1" ";dir2=@crys_hkl:0,1,-1@lab:0,1,0" && strlen("Ge_sg227.ncmat;mos=0.3deg;incoh_elas=0;inelas=0" ";dir1=@crys_hkl:5,1,1@lab:0,0,1" ";dir2=@crys_hkl:0,1,-1@lab:0,1,0")) ^ "./NCrystal_example.c", line 11524: warning: controlling expression is constant stracpy(_monochromator_var._parameters.cfg, "Ge_sg227.ncmat;mos=0.3deg;incoh_elas=0;inelas=0" ";dir1=@crys_hkl:5,1,1@lab:0,0,1" ";dir2=@crys_hkl:0,1,-1@lab:0,1,0" ? "Ge_sg227.ncmat;mos=0.3deg;incoh_elas=0;inelas=0" ";dir1=@crys_hkl:5,1,1@lab:0,0,1" ";dir2=@crys_hkl:0,1,-1@lab:0,1,0" : "", 16384); ^ "./NCrystal_example.c", line 11658: warning: controlling expression is constant if("" && strlen("")) ^ "./NCrystal_example.c", line 11659: warning: controlling expression is constant stracpy(_powder_pattern_detc_var._parameters.user1, "" ? "" : "", 16384); ^ "./NCrystal_example.c", line 11662: warning: controlling expression is constant if("" && strlen("")) ^ "./NCrystal_example.c", line 11663: warning: controlling expression is constant stracpy(_powder_pattern_detc_var._parameters.user2, "" ? "" : "", 16384); ^ "./NCrystal_example.c", line 11666: warning: controlling expression is constant if("" && strlen("")) ^ "./NCrystal_example.c", line 11667: warning: controlling expression is constant stracpy(_powder_pattern_detc_var._parameters.user3, "" ? "" : "", 16384); ^ "./NCrystal_example.c", line 11684: warning: controlling expression is constant if("banana, angle limits=[10 170], bins=500" && strlen("banana, angle limits=[10 170], bins=500")) ^ "./NCrystal_example.c", line 11685: warning: controlling expression is constant stracpy(_powder_pattern_detc_var._parameters.options, "banana, angle limits=[10 170], bins=500" ? "banana, angle limits=[10 170], bins=500" : "", 16384); ^ "./NCrystal_example.c", line 11688: warning: controlling expression is constant if("NULL" && strlen("NULL")) ^ "./NCrystal_example.c", line 11689: warning: controlling expression is constant stracpy(_powder_pattern_detc_var._parameters.filename, "NULL" ? "NULL" : "", 16384); ^ "./NCrystal_example.c", line 11692: warning: controlling expression is constant if("NULL" && strlen("NULL")) ^ "./NCrystal_example.c", line 11693: warning: controlling expression is constant stracpy(_powder_pattern_detc_var._parameters.geometry, "NULL" ? "NULL" : "", 16384); ^ "./NCrystal_example.c", line 11697: warning: controlling expression is constant if("NULL" && strlen("NULL")) ^ "./NCrystal_example.c", line 11698: warning: controlling expression is constant stracpy(_powder_pattern_detc_var._parameters.username1, "NULL" ? "NULL" : "", 16384); ^ "./NCrystal_example.c", line 11701: warning: controlling expression is constant if("NULL" && strlen("NULL")) ^ "./NCrystal_example.c", line 11702: warning: controlling expression is constant stracpy(_powder_pattern_detc_var._parameters.username2, "NULL" ? "NULL" : "", 16384); ^ "./NCrystal_example.c", line 11705: warning: controlling expression is constant if("NULL" && strlen("NULL")) ^ "./NCrystal_example.c", line 11706: warning: controlling expression is constant stracpy(_powder_pattern_detc_var._parameters.username3, "NULL" ? "NULL" : "", 16384); ^ "./NCrystal_example.c", line 12233: warning: incompatible redefinition of macro "exit" (declared at line 464) #define exit(...) noprintf() ^ "./NCrystal_example.c", line 13214: warning: variable "_particle_save" was declared but never referenced _class_particle _particle_save; ^ "./NCrystal_example.c", line 13899: warning: variable "t" was declared but never referenced time_t t; ^ "./NCrystal_example.c", line 13900: warning: variable "ct" was set but never used clock_t ct; ^ "./NCrystal_example.c", line 1353: warning: variable "mcstartdate" was set but never used static long mcstartdate = 0; /* start simulation time */ ^ "./NCrystal_example.c", line 2707: warning: function "strcpy_valid" was declared but never referenced static char *strcpy_valid(char *valid, char *original) ^ mcgenstate: 66, Generating acc routine seq Generating Tesla code particle_getvar: 80, Generating acc routine seq Generating Tesla code particle_getvar_void: 109, Generating acc routine seq Generating Tesla code particle_setvar_void: 133, Generating acc routine seq Generating Tesla code particle_setvar_void_array: 155, Generating acc routine seq Generating Tesla code particle_restore: 166, Generating acc routine seq Generating Tesla code particle_getuservar_byid: 175, Generating acc routine seq Generating Tesla code particle_uservar_init: 185, Generating acc routine seq Generating Tesla code noprintf: 1393, Generating acc routine seq Generating Tesla code str_comp: 1397, Generating acc routine seq Generating Tesla code str_len: 1406, Generating acc routine seq Generating Tesla code mcget_ncount: 3684, Generating acc routine seq Generating Tesla code coords_set: 3921, Generating acc routine seq Generating Tesla code coords_get: 3932, Generating acc routine seq Generating Tesla code coords_add: 3941, Generating acc routine seq Generating Tesla code coords_sub: 3953, Generating acc routine seq Generating Tesla code coords_neg: 3965, Generating acc routine seq Generating Tesla code coords_scale: 3975, Generating acc routine seq Generating Tesla code coords_sp: 3985, Generating acc routine seq Generating Tesla code coords_xp: 3993, Generating acc routine seq Generating Tesla code coords_len: 4003, Generating acc routine seq Generating Tesla code coords_print: 4025, Generating acc routine seq Generating Tesla code coords_norm: 4032, Generating acc routine seq Generating Tesla code rot_set_rotation: 4078, Generating acc routine seq Generating Tesla code rot_test_identity: 4113, Generating acc routine seq Generating Tesla code rot_mul: 4124, Generating acc routine seq Generating Tesla code rot_copy: 4141, Generating acc routine seq Generating Tesla code rot_transpose: 4152, Generating acc routine seq Generating Tesla code rot_apply: 4168, Generating acc routine seq Generating Tesla code vec_prod_func: 4197, Generating acc routine seq Generating Tesla code scalar_prod: 4208, Generating acc routine seq Generating Tesla code norm_func: 4212, Generating acc routine seq Generating Tesla code sort_absorb_last: 4247, Generating present(pbuffer[:1],particles[:1]) Generating Tesla code 4254, #pragma acc loop gang, vector(128) /* blockIdx.x threadIdx.x */ 4263, #pragma acc loop seq 4247, Generating implicit copy(lens[:]) [if not already present] 4265, Accelerator restriction: induction variable live-out from loop: i 4266, Accelerator restriction: induction variable live-out from loop: i 4267, Accelerator restriction: induction variable live-out from loop: i 4268, Accelerator restriction: induction variable live-out from loop: i 4270, Accelerator restriction: induction variable live-out from loop: j 4271, Accelerator restriction: induction variable live-out from loop: j 4272, Accelerator restriction: induction variable live-out from loop: j 4273, Accelerator restriction: induction variable live-out from loop: j 4295, Generating present(pbuffer[:1]) Generating Tesla code 4299, #pragma acc loop gang, vector(128) /* blockIdx.x threadIdx.x */ 4302, #pragma acc loop seq 4295, Generating implicit copyin(los[:]) [if not already present] Generating implicit copy(particles[:]) [if not already present] Generating implicit copyin(lens[:]) [if not already present] 4319, Generating present(particles[:1]) Generating Tesla code 4323, #pragma acc loop gang, vector(128) /* blockIdx.x threadIdx.x */ 4330, #pragma acc loop seq 4319, Local memory used for targetbuffer,sourcebuffer mccoordschange: 4389, Generating acc routine seq Generating Tesla code mccoordschange_polarisation: 4420, Generating acc routine seq Generating Tesla code normal_vec: 4437, Generating acc routine seq Generating Tesla code solve_2nd_order: 4536, Generating acc routine seq Generating Tesla code _randvec_target_circle: 4620, Generating acc routine seq Generating Tesla code _randvec_target_rect_angular: 4686, Generating acc routine seq Generating Tesla code _randvec_target_rect_real: 4763, Generating acc routine seq Generating Tesla code kiss_srandom: 5035, Generating acc routine seq Generating Tesla code kiss_random: 5045, Generating acc routine seq Generating Tesla code _hash: 5071, Generating acc routine seq Generating Tesla code _randnorm2: 5112, Generating acc routine seq Generating Tesla code _randtriangle: 5123, Generating acc routine seq Generating Tesla code _rand01: 5128, Generating acc routine seq Generating Tesla code _randpm1: 5136, Generating acc routine seq Generating Tesla code _rand0max: 5144, Generating acc routine seq Generating Tesla code _randminmax: 5151, Generating acc routine seq Generating Tesla code mcsetstate: 5768, Generating acc routine seq Generating Tesla code inside_rectangle: 5860, Generating acc routine seq Generating Tesla code box_intersect: 5877, Generating acc routine seq Generating Tesla code cylinder_intersect: 5992, Generating acc routine seq Generating Tesla code sphere_intersect: 6047, Generating acc routine seq Generating Tesla code Monitor_nD_Trace: 7229, Generating acc routine seq Generating Tesla code Table_Index: 9137, Generating acc routine seq Generating Tesla code Table_Value: 9205, Generating acc routine seq Generating Tesla code Table_Value2d: 9284, Generating acc routine seq Generating Tesla code Table_Interp1d: 9722, Generating acc routine seq Generating Tesla code Table_Interp1d_nearest: 9738, Generating acc routine seq Generating Tesla code Table_Interp2d: 9756, Generating acc routine seq Generating Tesla code off_F: 10010, Generating acc routine seq Generating Tesla code off_sign: 10015, Generating acc routine seq Generating Tesla code off_normal: 10025, Generating acc routine seq Generating Tesla code off_pnpoly: 10051, Generating acc routine seq Generating Tesla code off_intersectPoly: 10114, Generating acc routine seq Generating Tesla code off_init_planes: 10245, Generating acc routine seq Generating Tesla code off_clip_3D_mod: 10290, Generating acc routine seq Generating Tesla code off_clip_3D_mod_grav: 10406, Generating acc routine seq Generating Tesla code off_compare: 10497, Generating acc routine seq Generating Tesla code off_cleanDouble: 10509, Generating acc routine seq Generating Tesla code off_cleanInOut: 10544, Generating acc routine seq Generating Tesla code Min_int: 10794, Generating acc routine seq Generating Tesla code merge: 10801, Generating acc routine seq Generating Tesla code p_to_quadratic: 10905, Generating implicit acc routine seq Generating acc routine seq Generating Tesla code quadraticSolve: 10920, Generating implicit acc routine seq Generating acc routine seq Generating Tesla code off_intersect_all: 10974, Generating acc routine seq Generating Tesla code off_intersect: 11082, Generating acc routine seq Generating Tesla code off_x_intersect: 11104, Generating acc routine seq Generating Tesla code init: 12205, Generating update device(_monochromator_var,_source_var,_powder_sample_var,_instrument_var,_mono_out_var,_mono_arm_var,_powder_pattern_detc_var,_origin_var) class_Progress_bar_trace: 12247, Generating acc routine seq Generating Tesla code class_Source_div_trace: 12335, Generating acc routine seq Generating Tesla code class_Monitor_nD_trace: 12596, Generating acc routine seq Generating Tesla code raytrace_all_funnel: 13140, Generating present(particles[:1]) Generating Tesla code 13144, #pragma acc loop gang, vector(128) /* blockIdx.x threadIdx.x */ 13151, Generating present(particles[:1]) Generating Tesla code 13156, #pragma acc loop gang, vector(128) /* blockIdx.x threadIdx.x */ 13151, Local memory used for _particle_save Generating implicit copy(.I0422,.I0425,.I0432,.I0429) [if not already present] 13209, Generating present(particles[:1]) Generating Tesla code 13212, #pragma acc loop gang, vector(128) /* blockIdx.x threadIdx.x */ 13239, Generating present(particles[:1]) Generating Tesla code 13242, #pragma acc loop gang, vector(128) /* blockIdx.x threadIdx.x */ 13239, Local memory used for _particle_save Generating implicit copy(.I0453,.I0450) [if not already present] finally: 13578, Generating update self(_monochromator_var,_source_var,_powder_sample_var,_instrument_var,_mono_out_var,_mono_arm_var,_powder_pattern_detc_var,_origin_var) mcenabletrace: 5261, Generating update device(mcdotrace) /users/willend/McStas/mcstas/3.x-dev/lib/libNCrystal.so: undefined reference to `std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream()@GLIBCXX_3.4.26' pgacclnk: child process exit status 1: /usr/bin/ld