loading system configuration loading override configuration from /home/nexmap/pkwi/McCode/tools/Python/mctest/../mccodelib/mcstas-test/McStas_8GPU/mccode_config.json INFO: Using directory: "1" INFO: Using existing c-file: ./Test_TasReso.c INFO: Using existing binary: ./Test_TasReso.out INFO: === Simulation 'TasResoTest' (/home/nexmap/pkwi/TESTS/2022-08-01/McStas_8GPU_5e7/Test_TasReso/Test_TasReso.instr): running on 7 nodes (master is 'hypatia.fysik.dtu.dk', MPI version 3.1). Have found 8 GPU devices on rank 0. Will use device 0. -------------------------------------------------------------------------------- Source: lambda = 4.5000 A, k = 1.3963 1/A, E = 4.0397 meV Monochromator: ki = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Analyser: kf = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Sample: num = 2, theta = 26.7400, 2theta = 53.4800 -------------------------------------------------------------------------------- [TasResoTest] Initialize Opening input file '/u/data/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/../mccodelib/../../../data/HOPG.rfl' (Table_Read_Offset) Opening input file '/u/data/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/../mccodelib/../../../data/HOPG.trm' (Table_Read_Offset) Incoherent: sample_Vana: Vc=13.827 [Angs] sigma_abs=5.08 [barn] sigma_inc=5.08 [barn] Opening input file '/u/data/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/../mccodelib/../../../data/TasResoTest_xtal.laz' (Table_Read_Offset) Single_crystal: TasResoTest_xtal.laz structure a=5 b=5 c=5 aa=90 bb=90 cc=90 V0=125 Single_crystal: sample_xtal: Read 6 reflections from file 'TasResoTest_xtal.laz' Single_crystal: sample_xtal: Vc=125 [Angs] sigma_abs=0 [barn] sigma_inc=0 [barn] reflections=TasResoTest_xtal.laz Reusing input file 'HOPG.rfl' (Table_Read_Offset) Reusing input file 'HOPG.trm' (Table_Read_Offset) Have found 8 GPU devices on rank 4. Will use device 4. -------------------------------------------------------------------------------- Source: lambda = 4.5000 A, k = 1.3963 1/A, E = 4.0397 meV Monochromator: ki = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Analyser: kf = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Sample: num = 2, theta = 26.7400, 2theta = 53.4800 -------------------------------------------------------------------------------- [TasResoTest] Initialize Single_crystal: TasResoTest_xtal.laz structure a=5 b=5 c=5 aa=90 bb=90 cc=90 V0=125 Single_crystal: sample_xtal: Read 6 reflections from file 'TasResoTest_xtal.laz' Single_crystal: sample_xtal: Vc=125 [Angs] sigma_abs=0 [barn] sigma_inc=0 [barn] reflections=TasResoTest_xtal.laz Have found 8 GPU devices on rank 2. Will use device 2. -------------------------------------------------------------------------------- Source: lambda = 4.5000 A, k = 1.3963 1/A, E = 4.0397 meV Monochromator: ki = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Analyser: kf = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Sample: num = 2, theta = 26.7400, 2theta = 53.4800 -------------------------------------------------------------------------------- [TasResoTest] Initialize Single_crystal: TasResoTest_xtal.laz structure a=5 b=5 c=5 aa=90 bb=90 cc=90 V0=125 Single_crystal: sample_xtal: Read 6 reflections from file 'TasResoTest_xtal.laz' Single_crystal: sample_xtal: Vc=125 [Angs] sigma_abs=0 [barn] sigma_inc=0 [barn] reflections=TasResoTest_xtal.laz Have found 8 GPU devices on rank 1. Will use device 1. -------------------------------------------------------------------------------- Source: lambda = 4.5000 A, k = 1.3963 1/A, E = 4.0397 meV Monochromator: ki = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Analyser: kf = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Sample: num = 2, theta = 26.7400, 2theta = 53.4800 -------------------------------------------------------------------------------- [TasResoTest] Initialize Single_crystal: TasResoTest_xtal.laz structure a=5 b=5 c=5 aa=90 bb=90 cc=90 V0=125 Single_crystal: sample_xtal: Read 6 reflections from file 'TasResoTest_xtal.laz' Single_crystal: sample_xtal: Vc=125 [Angs] sigma_abs=0 [barn] sigma_inc=0 [barn] reflections=TasResoTest_xtal.laz Have found 8 GPU devices on rank 6. Will use device 6. -------------------------------------------------------------------------------- Source: lambda = 4.5000 A, k = 1.3963 1/A, E = 4.0397 meV Monochromator: ki = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Analyser: kf = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Sample: num = 2, theta = 26.7400, 2theta = 53.4800 -------------------------------------------------------------------------------- [TasResoTest] Initialize Have found 8 GPU devices on rank 3. Will use device 3. -------------------------------------------------------------------------------- Source: lambda = 4.5000 A, k = 1.3963 1/A, E = 4.0397 meV Monochromator: ki = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Analyser: kf = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Sample: num = 2, theta = 26.7400, 2theta = 53.4800 -------------------------------------------------------------------------------- [TasResoTest] Initialize Have found 8 GPU devices on rank 5. Will use device 5. -------------------------------------------------------------------------------- Source: lambda = 4.5000 A, k = 1.3963 1/A, E = 4.0397 meV Monochromator: ki = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Analyser: kf = 1.3963, theta = 42.1165 deg, d = 3.3550, vfoc = 0.6706 m, hfoc = 1.4911 m Sample: num = 2, theta = 26.7400, 2theta = 53.4800 -------------------------------------------------------------------------------- [TasResoTest] Initialize Single_crystal: TasResoTest_xtal.laz structure a=5 b=5 c=5 aa=90 bb=90 cc=90 V0=125 Single_crystal: sample_xtal: Read 6 reflections from file 'TasResoTest_xtal.laz' Single_crystal: sample_xtal: Vc=125 [Angs] sigma_abs=0 [barn] sigma_inc=0 [barn] reflections=TasResoTest_xtal.laz Single_crystal: TasResoTest_xtal.laz structure a=5 b=5 c=5 aa=90 bb=90 cc=90 V0=125 Single_crystal: sample_xtal: Read 6 reflections from file 'TasResoTest_xtal.laz' Single_crystal: sample_xtal: Vc=125 [Angs] sigma_abs=0 [barn] sigma_inc=0 [barn] reflections=TasResoTest_xtal.laz Single_crystal: TasResoTest_xtal.laz structure a=5 b=5 c=5 aa=90 bb=90 cc=90 V0=125 Single_crystal: sample_xtal: Read 6 reflections from file 'TasResoTest_xtal.laz' Single_crystal: sample_xtal: Vc=125 [Angs] sigma_abs=0 [barn] sigma_inc=0 [barn] reflections=TasResoTest_xtal.laz *** TRACE end *** Save [TasResoTest] Detector: psdmon_I=994.677 psdmon_ERR=57.4757 psdmon_N=573 "psd.dat" Detector: divmon_I=961.454 divmon_ERR=56.3555 divmon_N=554 "div.dat" Detector: lmon_I=994.677 lmon_ERR=57.4757 lmon_N=573 "lam.dat" : 4.04694 meV , E-width : 0.0666049 meV : 4.03489 meV , E-width : 0.0696384 meV Detector: emon_I=994.677 emon_ERR=57.4757 emon_N=573 "E.dat" : 4.02748 meV , E-width : 0.0545461 meV : 4.03548 meV , E-width : 0.0575418 meV Events: "reso.dat" : 4.04827 meV , E-width : 0.0505769 meV : 4.04691 meV , E-width : 0.0566829 meV : 4.0415 meV , E-width : 0.0498454 meV [hypatia:18326] *** Process received signal *** [hypatia:18326] Signal: Segmentation fault (11) [hypatia:18326] Signal code: Invalid permissions (2) [hypatia:18326] Failing at address: 0x7f72627ff9c8 [hypatia:18328] *** Process received signal *** [hypatia:18328] Signal: Segmentation fault (11) [hypatia:18328] Signal code: Invalid permissions (2) [hypatia:18328] Failing at address: 0x7f15aa7ff9c8 [hypatia:18330] *** Process received signal *** [hypatia:18330] Signal: Segmentation fault (11) [hypatia:18330] Signal code: Invalid permissions (2) [hypatia:18330] Failing at address: 0x7fddda7ff9c8 [hypatia:18332] *** Process received signal *** [hypatia:18332] Signal: Segmentation fault (11) [hypatia:18332] Signal code: Invalid permissions (2) [hypatia:18332] Failing at address: 0x7fe09c7ff9c8 [hypatia:18334] *** Process received signal *** [hypatia:18334] Signal: Segmentation fault (11) [hypatia:18334] Signal code: Invalid permissions (2) [hypatia:18334] Failing at address: 0x7f2b9c7ff9c8 [hypatia:18335] *** Process received signal *** [hypatia:18335] Signal: Segmentation fault (11) [hypatia:18335] Signal code: Invalid permissions (2) [hypatia:18335] Failing at address: 0x7f183c7ff9c8 [hypatia:18326] *** End of error message *** [hypatia:18328] *** End of error message *** [hypatia:18330] *** End of error message *** [hypatia:18332] *** End of error message *** [hypatia:18334] *** End of error message *** [hypatia:18335] *** End of error message *** [hypatia:18336] *** Process received signal *** [hypatia:18336] Signal: Segmentation fault (11) [hypatia:18336] Signal code: Invalid permissions (2) [hypatia:18336] Failing at address: 0x7f563c7ff9c8 [hypatia:18336] *** End of error message *** /u/data/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/../mccodelib/../../../bin/acc_gpu_bind: line 12: 18335 Segmentation fault "$@" -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- /u/data/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/../mccodelib/../../../bin/acc_gpu_bind: line 12: 18334 Segmentation fault "$@" -------------------------------------------------------------------------- mpirun detected that one or more processes exited with non-zero status, thus causing the job to be terminated. The first process to do so was: Process name: [[45756,1],5] Exit code: 139 --------------------------------------------------------------------------