INFO: No output directory specified (--dir)
INFO: Using directory: "RTP_NeutronRadiography_20251212_034229"
INFO: Regenerating c-file: RTP_NeutronRadiography.c
DEBUG: CMD: /usr/share/miniconda/envs/mcstas/bin/mcstas -t -o ./RTP_NeutronRadiography.c RTP_NeutronRadiography.instr

-----------------------------------------------------------
WARNING: Existing (COPY) EXTEND block in COMPONENT sample_outer2:
  EXTEND %{
      if (SCATTERED) sample_scattered+=SCATTERED;
  %}

is overwritten by:
  EXTEND %{
      if (SCATTERED) sample_scattered+=SCATTERED;
  %}
-----------------------------------------------------------

-----------------------------------------------------------
WARNING: Existing (COPY) EXTEND block in COMPONENT image_plate_eff:
  EXTEND %{
    /* take into account ZnS scintillator efficiency */
    double eff=0.5;
    double v=sqrt(vx*vx+vy*vy+vz*vz);
    p *= 1.0-exp(3960.0/v*log(1.0-eff/100.0));
  %}

is overwritten by:
  EXTEND %{
  %}
-----------------------------------------------------------

-----------------------------------------------------------
WARNING: Existing (COPY) EXTEND block in COMPONENT image_plate_scattered:
  EXTEND %{
    /* take into account ZnS scintillator efficiency */
    double eff=0.5;
    double v=sqrt(vx*vx+vy*vy+vz*vz);
    p *= 1.0-exp(3960.0/v*log(1.0-eff/100.0));
  %}

is overwritten by:
  EXTEND %{
  %}
-----------------------------------------------------------
CFLAGS=
      
WARNING:
 The parameter format of sample_outer1 is initialized 
 using a static {,,,} vector.
  -> Such static vectors support literal numbers ONLY.
  -> Any vector use of variables or defines must happen via a 
     DECLARE/INITIALIZE pointer.


-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout: 

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:

-----------------------------------------------------------
DEBUG: CMD: /usr/share/miniconda/envs/mcstas/bin/mcstas finished
INFO: Recompiling: ./RTP_NeutronRadiography.out
DEBUG: CMD: mpicc -o ./RTP_NeutronRadiography.out ./RTP_NeutronRadiography.c -lm -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/usr/share/miniconda/envs/mcstas/lib -Wl,-rpath-link,/usr/share/miniconda/envs/mcstas/lib -L/usr/share/miniconda/envs/mcstas/lib -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /usr/share/miniconda/envs/mcstas/include -DUSE_MPI -lmpi -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /usr/share/miniconda/envs/mcstas/include -O2 -g -DNDEBUG -I/usr/share/miniconda/envs/mcstas/include -Wl,-rpath,/usr/share/miniconda/envs/mcstas/lib -L/usr/share/miniconda/envs/mcstas/lib -fno-PIC -fPIE -flto -O3 -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm
lto-wrapper: warning: using serial compilation of 3 LTRANS jobs
lto-wrapper: note: see the '-flto' option documentation for more information
/usr/share/miniconda/envs/mcstas/bin/../libexec/gcc/x86_64-conda-linux-gnu/14.3.0/ld: /tmp/ccIteeYI.ltrans1.ltrans.o: in function `read_line_data.part.0':
/home/runner/work/McCode/McCode/run_test-suite/mcstas-3.99.99_mpi_x_2_1e6_ubuntu-latest_mpich_Linux/RTP_NeutronRadiography/./RTP_NeutronRadiography.c:12881:(.text.read_line_data.part.0+0xe5): warning: the use of `tmpnam' is dangerous, better use `mkstemp'
DEBUG: CMD: mpicc finished
INFO: ===