loading system configuration
loading override configuration from /home/nexmap/pkwi/McCode/tools/Python/mctest/../mccodelib/mcstas-test/McStas_CPU_MPICC_KISS/mccode_config.json
INFO: No output directory specified (--dir)
INFO: Using directory: "Union_external_component_20230901_002740"
INFO: Regenerating c-file: Union_external_component.c
DEBUG: CMD: mcstas -t -o ./Union_external_component.c /home/nexmap/pkwi/TESTS/2023-09-01/McStas_CPU_MPICC_KISS_1e7/Union_external_component/Union_external_component.instr
Warning: DECLARE block contains 2 assignments (= sign).
         Move them into an INITIALIZE section. May fail at compile.
CFLAGS= -I@MCCODE_LIB@/share/ -DFUNNEL 
          
WARNING:
 The parameter format of Al_powder is initialized 
 using a static {,,,} vector.
  -> Such static vectors support literal numbers ONLY.
  -> Any vector use of variables or defines must happen via a 
     DECLARE/INITIALIZE pointer.


WARNING:
 The parameter format of cylinder_sample_powder is initialized 
 using a static {,,,} vector.
  -> Such static vectors support literal numbers ONLY.
  -> Any vector use of variables or defines must happen via a 
     DECLARE/INITIALIZE pointer.


-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout: 

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:
Component test_sample is NOACC, CPUONLY=1
-> FUNNEL mode enabled, SPLIT within buffer.
-> CPU section from component test_sample
-> GPU kernel from component cylinder_sample_powder
Component test_sample_after is NOACC, CPUONLY=1
-> FUNNEL mode enabled, SPLIT within buffer.
-> CPU section from component test_sample_after
-> GPU kernel from component m4pi

-----------------------------------------------------------
DEBUG: CMD: mcstas finished
INFO: Recompiling: ./Union_external_component.out
DEBUG: CMD: mpicc -o ./Union_external_component.out ./Union_external_component.c -lm -DUSE_MPI -lmpi             -g -lm -O2 -DUSE_MPI -lmpi -std=c99 -D_POSIX_SOURCE  -I/u/data/pkwi/McStas/mcstas/3.x-dev/tools/Python/mcrun/../mccodelib/../../../share/ -DFUNNEL
./Union_external_component.c: In function ‘write_tagging_tree’:
./Union_external_component.c:7945:105: warning: passing argument 4 of ‘qsort’ from incompatible pointer type [-Wincompatible-pointer-types]
 7945 |   qsort(total_history.saved_histories,total_history.used_elements,sizeof (struct saved_history_struct), Sample_compare_history_intensities);
      |                                                                                                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      |                                                                                                         |
      |                                                                                                         int (*)(const struct saved_history_struct *, const struct saved_history_struct *)
In file included from ./Union_external_component.c:261:
/usr/include/stdlib.h:837:34: note: expected ‘__compar_fn_t’ {aka ‘int (*)(const void *, const void *)’} but argument is of type ‘int (*)(const struct saved_history_struct *, const struct saved_history_struct *)’
  837 |                    __compar_fn_t __compar) __nonnull ((1, 4));
      |                    ~~~~~~~~~~~~~~^~~~~~~~
./Union_external_component.c:7954:20: warning: passing argument 1 of ‘printf_history’ from incompatible pointer type [-Wincompatible-pointer-types]
 7954 |     printf_history(&total_history.saved_histories[history_iterate]);
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      |                    |
      |                    struct saved_history_struct *
./Union_external_component.c:517:5: note: in definition of macro ‘MPI_MASTER’
  517 |   { statement; } \
      |     ^~~~~~~~~
./Union_external_component.c:7775:50: note: expected ‘struct dynamic_history_list *’ but argument is of type ‘struct saved_history_struct *’
 7775 | void printf_history(struct dynamic_history_list *history) {
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
./Union_external_component.c: In function ‘cif2hkl’:
./Union_external_component.c:37924:38: warning: return discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
37924 |     if(!ext || ext == infile) return infile;
      |                                      ^~~~~~
./Union_external_component.c:37933:41: warning: return discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
37933 |       && strcasecmp(ext, "res")) return infile;
      |                                         ^~~~~~
./Union_external_component.c:37936:26: warning: return discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
37936 |     if (!OUTFILE) return infile;
      |                          ^~~~~~
/usr/bin/ld: /u/data/pkwi/tmp-nightly//ccXuu9CM.o: in function `cif2hkl':
/u/data/pkwi/TESTS/2023-09-01/McStas_CPU_MPICC_KISS_1e7/Union_external_component/./Union_external_component.c:37938: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
DEBUG: CMD: mpicc finished
INFO: ===